MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Providencia alcalifaciens WMus003.1

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PROKKA Genome Annotation:

contigs: 66

bases: 3,919,227 bps

CDS: 3,576

rRNA: 12

Repeat region:

tmRNA: 1

tRNA: 80

misc RNA:

Total features: 3,669

Total number of protein coding genes annotated/found: 3,576

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Items 21 - 40

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Molecule ^	PID/GenBank ID *	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5002\|JADGLZ010000010.1	SEQF5002_00021	NA AA	375/125	28101-28475	Diacylglycerol kinase
SEQF5002\|JADGLZ010000010.1	SEQF5002_00022	NA AA	618/206	28614-29231	LexA repressor
SEQF5002\|JADGLZ010000010.1	SEQF5002_00023	NA AA	519/173	29991-29473	Zinc uptake regulation protein
SEQF5002\|JADGLZ010000010.1	SEQF5002_00024	NA AA	579/193	30966-31544	Major MR/P fimbria protein
SEQF5002\|JADGLZ010000010.1	SEQF5002_00025	NA AA	2490/830	31638-34127	Outer membrane usher protein PapC
SEQF5002\|JADGLZ010000010.1	SEQF5002_00026	NA AA	738/246	34162-34899	Chaperone protein PapD
SEQF5002\|JADGLZ010000010.1	SEQF5002_00027	NA AA	492/164	34911-35402	putative fimbrial-like protein YfcQ
SEQF5002\|JADGLZ010000010.1	SEQF5002_00028	NA AA	495/165	35414-35908	putative fimbrial-like protein YfcQ
SEQF5002\|JADGLZ010000010.1	SEQF5002_00029	NA AA	552/184	35908-36459	putative fimbrial-like protein YfcP
SEQF5002\|JADGLZ010000010.1	SEQF5002_00030	NA AA	855/285	36525-37379	hypothetical protein
SEQF5002\|JADGLZ010000010.1	SEQF5002_00031	NA AA	477/159	38020-37544	hypothetical protein
SEQF5002\|JADGLZ010000010.1	SEQF5002_00032	NA AA	969/323	38989-38021	hypothetical protein
SEQF5002\|JADGLZ010000010.1	SEQF5002_00033	NA AA	2037/679	41470-39434	Vitamin B12 transporter BtuB
SEQF5002\|JADGLZ010000010.1	SEQF5002_00034	NA AA	846/282	42454-41609	putative nicotinate-nucleotide pyrophosphorylase [carboxylating]
SEQF5002\|JADGLZ010000010.1	SEQF5002_00035	NA AA	819/273	43269-42451	Ubiquinone biosynthesis O-methyltransferase%2C mitochondrial
SEQF5002\|JADGLZ010000010.1	SEQF5002_00036	NA AA	768/256	44048-43281	putative ABC transporter ATP-binding protein
SEQF5002\|JADGLZ010000010.1	SEQF5002_00037	NA AA	1005/335	45049-44045	putative ABC transporter permease protein
SEQF5002\|JADGLZ010000010.1	SEQF5002_00038	NA AA	1032/344	46077-45046	Vitamin B12-binding protein
SEQF5002\|JADGLZ010000010.1	SEQF5002_00039	NA AA	1005/335	46262-47266	HTH-type transcriptional regulator GntR
SEQF5002\|JADGLZ010000010.1	SEQF5002_00040	NA AA	543/181	47482-48024	Thermoresistant gluconokinase

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Page last updated: July 7, 2021 08:39:35